| # | Team | M. | W | D | L | goals | Dif | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
MŠK Žilina | 695 | 356 | 157 | 180 | 1593:975 | 618 | 1225 |
| 2 |
|
Slovan Bratislava | 616 | 359 | 130 | 125 | 1480:743 | 737 | 1207 |
| 3 |
|
Spartak Trnava | 690 | 309 | 150 | 229 | 1140:913 | 227 | 1077 |
| 4 |
|
MFK Ružomberok | 693 | 270 | 200 | 221 | 1149:997 | 152 | 1010 |
| 5 |
|
AS Trenčín | 594 | 232 | 138 | 223 | 1124:1069 | 55 | 834 |
| 6 |
|
FC DAC 1904 | 480 | 184 | 125 | 169 | 842:777 | 65 | 671 |
| 7 |
|
Dukla Banská Bystrica | 469 | 159 | 130 | 180 | 652:667 | -15 | 607 |
| 8 |
|
Zlaté Moravce | 527 | 134 | 126 | 265 | 676:1048 | -372 | 528 |
| 9 |
|
FK Senica | 417 | 139 | 106 | 171 | 572:712 | -140 | 523 |
| 10 |
|
FC Nitra | 427 | 135 | 99 | 193 | 520:700 | -180 | 504 |
| 11 |
|
FC Petržalka | 243 | 120 | 59 | 64 | 421:290 | 131 | 419 |
| 12 |
|
FC VSS Košice | 300 | 100 | 79 | 121 | 360:411 | -51 | 379 |
| 13 |
|
MFK Dubnica | 276 | 79 | 85 | 112 | 290:381 | -91 | 322 |
| 14 |
|
MFK Zemplín Michalovce | 280 | 78 | 69 | 132 | 441:656 | -215 | 303 |
| 15 |
|
Železiarne Podbrezová | 223 | 70 | 49 | 102 | 349:410 | -61 | 259 |
| 16 |
|
1. FC Tatran Prešov | 229 | 53 | 64 | 110 | 185:332 | -147 | 223 |
| 17 |
|
Spartak Myjava | 151 | 55 | 27 | 50 | 167:177 | -10 | 192 |
| 18 |
|
Inter Bratislava | 144 | 39 | 40 | 65 | 142:205 | -63 | 157 |
| 19 |
|
ŠKF Sereď | 124 | 38 | 31 | 55 | 241:323 | -82 | 145 |
| 20 |
|
MŠK Púchov | 108 | 29 | 24 | 55 | 94:161 | -67 | 111 |
| 21 |
|
MFK Skalica | 93 | 26 | 22 | 45 | 138:187 | -49 | 100 |
| 22 |
|
FK Pohronie | 91 | 18 | 28 | 45 | 155:258 | -103 | 82 |
| 23 |
|
FC Senec | 69 | 16 | 19 | 34 | 74:144 | -70 | 67 |
| 24 |
|
Tatran Liptovský Mikuláš | 65 | 14 | 16 | 35 | 112:203 | -91 | 58 |
| 25 |
|
MŠK Rimavská Sobota | 50 | 11 | 14 | 25 | 50:80 | -30 | 47 |
| 26 |
|
FC Košice | 28 | 6 | 6 | 16 | 43:96 | -53 | 24 |
| 27 |
|
Eldus Mocenok | 14 | 4 | 6 | 4 | 16:18 | -2 | 18 |
| 28 |
|
Slovan Duslo Šaľa | 14 | 1 | 5 | 8 | 15:23 | -8 | 8 |
