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| 26/10/2016 | 16:40 | Baník Ostrava | - | MFK Vítkovice | 1:0 (0:0) | |
| 28/10/2016 | 17:00 | FK Ústí nad Labem | - | FK Varnsdorf | 2:0 (0:0) | |
| 17:00 | 1. SC Znojmo | - | FK Baník Sokolov | 2:0 (1:0) | ||
| 29/10/2016 | 09:15 | FK Pardubice | - | Dynamo České Budějovice | 0:0 (0:0) | |
| 13:30 | FC Sellier & Bellot Vlašim | - | Viktoria Žižkov | 1:0 (1:0) | ||
| 13:30 | 1. SK Prostějov | - | FK MAS Táborsko | 2:3 (1:2) | ||
| 13:30 | MFK Frýdek-Místek, a.s. | - | Sigma Olomouc | 1:1 (0:0) | ||
| 17:00 | SFC Opava | - | FK Fotbal Třinec | 4:0 (4:0) |
| » Tables | Home | Away | First round | Second round |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Sigma Olomouc | 13 | 9 | 4 | 0 | 21:8 | 13 | 31 |
| 2 |
|
Baník Ostrava | 13 | 8 | 5 | 0 | 23:9 | 14 | 29 |
| 3 |
|
SFC Opava | 13 | 8 | 3 | 2 | 30:14 | 16 | 27 |
| 4 |
|
Dynamo České Budějovice | 13 | 7 | 3 | 3 | 18:10 | 8 | 24 |
| 5 |
|
FC Sellier & Bellot Vlašim | 13 | 7 | 2 | 4 | 22:16 | 6 | 23 |
| 6 |
|
1. SC Znojmo | 13 | 6 | 3 | 4 | 24:18 | 6 | 21 |
| 7 |
|
FK Ústí nad Labem | 13 | 6 | 2 | 5 | 17:16 | 1 | 20 |
| 8 |
|
MFK Frýdek-Místek, a.s. | 13 | 4 | 5 | 4 | 25:23 | 2 | 17 |
| 9 |
|
Viktoria Žižkov | 13 | 4 | 5 | 4 | 19:17 | 2 | 17 |
| 10 |
|
FK Baník Sokolov | 13 | 4 | 5 | 4 | 18:21 | -3 | 17 |
| 11 |
|
FK MAS Táborsko | 13 | 3 | 5 | 5 | 14:22 | -8 | 14 |
| 12 |
|
FK Varnsdorf | 13 | 3 | 4 | 6 | 13:17 | -4 | 13 |
| 13 |
|
FK Pardubice | 13 | 2 | 5 | 6 | 8:19 | -11 | 11 |
| 14 |
|
FK Fotbal Třinec | 13 | 2 | 3 | 8 | 18:32 | -14 | 9 |
| 15 |
|
MFK Vítkovice | 13 | 2 | 0 | 11 | 12:25 | -13 | 6 |
| 16 |
|
1. SK Prostějov | 13 | 1 | 2 | 10 | 10:25 | -15 | 5 |
| Promotion | |
| Relegation |
