1. Round | 15/07/2016 | Slaven Belupo | - | NK Inter Zaprešić | 2:0 | ||||
2. Round | 23/07/2016 | NK Inter Zaprešić | - | NK Osijek | 0:2 | ||||
3. Round | 30/07/2016 | HNK Cibalia | - | NK Inter Zaprešić | 3:3 | ||||
4. Round | 07/08/2016 | NK Inter Zaprešić | - | HNK Rijeka | 1:1 | ||||
5. Round | 13/08/2016 | Dinamo Zagreb | - | NK Inter Zaprešić | 2:1 | ||||
8. Round | 09/09/2016 | NK Inter Zaprešić | - | Hajduk Split | 1:1 | ||||
9. Round | 17/09/2016 | NK Istra 1961 | - | NK Inter Zaprešić | 4:1 | ||||
10. Round | 24/09/2016 | NK Inter Zaprešić | - | Slaven Belupo | 1:1 | ||||
11. Round | 01/10/2016 | NK Osijek | - | NK Inter Zaprešić | 1:1 | ||||
12. Round | 15/10/2016 | NK Inter Zaprešić | - | HNK Cibalia | 1:0 | ||||
14. Round | 29/10/2016 | NK Inter Zaprešić | - | Dinamo Zagreb | 0:1 | ||||
15. Round | 04/11/2016 | Lokomotiva Zagreb | - | NK Inter Zaprešić | 0:1 | ||||
33. Round | 13/05/2017 | Lokomotiva Zagreb | - | NK Inter Zaprešić | 2:0 | ||||
34. Round | 17/05/2017 | NK Inter Zaprešić | - | RNK Split | 1:0 | ||||
36. Round | 27/05/2017 | NK Inter Zaprešić | - | NK Istra 1961 | 0:3 |