| Premier Liga | Matches | W | D | L |  |
 |
 |
| home | 4 | 1 | 2 | 1 | 11 | - | - |
| away | 4 | 1 | - | 3 | 11 | 2 | - |
| overall | 8 | 2 | 2 | 4 | 22 | 2 | - |
| 1. Division | Matches | W | D | L | |
|
|
| home | 1 | 1 | - | - | 2 | - | - |
| away | 2 | 1 | 1 | - | 3 | - | 1 |
| overall | 3 | 2 | 1 | - | 5 | - | 1 |
| Premier Liga | Home | - | Guest | |
|
|
Results |
| 29/11/09 | Krylia Sovetov | - | FK Tom Tomsk | 5 | - | - | 1:3 |
| 14/08/10 | FK Tom Tomsk | - | Krylia Sovetov | 4 | - | - | 1:1 |
| 04/04/11 | Akhmat Grozny | - | FK Tom Tomsk | 2 | 1 | - | 2:0 |
| 27/08/11 | FK Tom Tomsk | - | FK Amkar Perm | 2 | - | - | 0:0 |
| 24/09/11 | Zenit St. Petersburg | - | FK Tom Tomsk | 2 | - | - | 4:0 |
| 12/03/12 | FK Tom Tomsk | - | Volga Nizhniy Novgorod | 3 | - | - | 1:0 |
| 16/07/13 | FK Amkar Perm | - | FK Tom Tomsk | 2 | 1 | - | 2:0 |
| 06/10/13 | FK Tom Tomsk | - | Zenit St. Petersburg | 2 | - | - | 0:3 |
| 1. Division | Home | - | Guest | |
|
|
Results |
| 31/08/15 | Shinnik Yaroslavl | - | FK Tom Tomsk | 2 | - | 1 | 0:1 |
| 17/07/18 | FK Tom Tomsk | - | Fakel Voronezh | 2 | - | - | 2:0 |
| 20/10/18 | Avangard Kursk | - | FK Tom Tomsk | 1 | - | - | 0:0 |
Russia