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| 1st(1st leg) | Mauritania | - | Burkina Faso | 0:0 | ||
| 2nd (2nd leg) | Burkina Faso | - | Mauritania | 3:0 | ||
| 1st(1st leg): 30/06/2000 | 2nd (2nd leg): 16/07/2000 | Winner: Burkina Faso | ||||
| 1st(1st leg) | Djibouti | - | Burundi | 1:3 | ||
| 2nd (2nd leg) | Burundi | - | Djibouti | 1:0 | ||
| 1st(1st leg): 30/06/2000 | 2nd (2nd leg): 15/07/2000 | Winner: Burundi | ||||
| 1st(1st leg) | Chad | - | Libya | 3:1 | ||
| 2nd (2nd leg) | Libya | - | Chad | 8:7 pso | ||
| 1st(1st leg): 30/06/2000 | 2nd (2nd leg): 14/07/2000 | Winner: Libya | ||||
| 1st(1st leg) | Gambia | - | Guinea | 2:2 | ||
| 2nd (2nd leg) | Guinea | - | Gambia | 2:0 | ||
| 1st(1st leg): 01/07/2000 | 2nd (2nd leg): 16/07/2000 | Winner: Guinea | ||||
| 1st(1st leg) | São Tomé and Príncipe | - | Gabon | 1:1 | ||
| 2nd (2nd leg) | Gabon | - | São Tomé and Príncipe | 4:1 | ||
| 1st(1st leg): 01/07/2000 | 2nd (2nd leg): 15/07/2000 | Winner: Gabon | ||||
| 1st(1st leg) | Botswana | - | Madagascar | 1:0 | ||
| 2nd (2nd leg) | Madagascar | - | Botswana | 2:0 | ||
| 1st(1st leg): 01/07/2000 | 2nd (2nd leg): 15/07/2000 | Winner: Madagascar | ||||
| 1st(1st leg) | Seychelles | - | Zimbabwe | 0:1 | ||
| 2nd (2nd leg) | Zimbabwe | - | Seychelles | 5:0 | ||
| 1st(1st leg): 01/07/2000 | 2nd (2nd leg): 16/07/2000 | Winner: Zimbabwe | ||||
| 1st(1st leg) | Tanzania | - | Mauritius | 0:1 | ||
| 2nd (2nd leg) | Mauritius | - | Tanzania | 3:2 | ||
| 1st(1st leg): 01/07/2000 | 2nd (2nd leg): 16/07/2000 | Winner: Mauritius | ||||
| 1st(1st leg) | Uganda | - | Malawi | 3:1 | ||
| 2nd (2nd leg) | Malawi | - | Uganda | 1:2 | ||
| 1st(1st leg): 01/07/2000 | 2nd (2nd leg): 15/07/2000 | Winner: Uganda | ||||
| 1st(1st leg) | Equatorial Guinea | - | Angola | 0:1 | ||
| 2nd (2nd leg) | Angola | - | Equatorial Guinea | 4:1 | ||
| 1st(1st leg): 02/07/2000 | 2nd (2nd leg): 16/07/2000 | Winner: Angola | ||||
| 1st(1st leg) | Benin | - | Namibia | 2:0 | ||
| 2nd (2nd leg) | Namibia | - | Benin | 8:2 | ||
| 1st(1st leg): 02/07/2000 | 2nd (2nd leg): 15/07/2000 | Winner: Namibia | ||||
| 1st(1st leg) | Niger | - | Ivory Coast | 0:1 | ||
| 2nd (2nd leg) | Ivory Coast | - | Niger | 6:0 | ||
| 1st(1st leg): 02/07/2000 | 2nd (2nd leg): 16/07/2000 | Winner: Ivory Coast | ||||
| 1st(1st leg) | Central Afr. Republic | - | Congo DR | 1:1 | ||
| 2nd (2nd leg) | Congo DR | - | Central Afr. Republic | 2:0 | ||
| 1st(1st leg): 02/07/2000 | 2nd (2nd leg): 16/07/2000 | Winner: Congo DR | ||||
| 1st(1st leg) | Sudan | - | Eritrea | 5:1 | ||
| 2nd (2nd leg) | Eritrea | - | Sudan | 2:1 | ||
| 1st(1st leg): 02/07/2000 | 2nd (2nd leg): 15/07/2000 | Winner: Sudan | ||||
| 1st(1st leg) | Rwanda | - | Congo | 2:1 | ||
| 2nd (2nd leg) | Congo | - | Rwanda | 5:1 | ||
| 1st(1st leg): 02/07/2000 | 2nd (2nd leg): 16/07/2000 | Winner: Congo | ||||
| 1st(1st leg) | Ethiopia | - | Zambia | 1:0 | ||
| 2nd (2nd leg) | Zambia | - | Ethiopia | 2:0 | ||
| 1st(1st leg): 02/07/2000 | 2nd (2nd leg): 15/07/2000 | Winner: Zambia | ||||
| 1st(1st leg) | Lesotho | - | Mozambique | 1:0 | ||
| 2nd (2nd leg) | Mozambique | - | Lesotho | 2:3 pso | ||
| 1st(1st leg): 02/07/2000 | 2nd (2nd leg): 16/07/2000 | Winner: Lesotho | ||||
| 1st(1st leg) | Eswatini | - | Kenya | 3:2 | ||
| 2nd (2nd leg) | Kenya | - | Eswatini | 3:0 | ||
| 1st(1st leg): 02/07/2000 | 2nd (2nd leg): 15/07/2000 | Winner: Kenya | ||||
| 1st(1st leg) | Morocco | - | Guinea-Bissau | dnp | ||
| 2nd (2nd leg) | Guinea-Bissau | - | Morocco | dnp | ||
| 1st(1st leg): 02/07/2000 | 2nd (2nd leg): 15/07/2000 | Winner: Morocco | ||||
| 1st(1st leg) | Cape Verde | - | Liberia | 1:0 | ||
| 2nd (2nd leg) | Liberia | - | Cape Verde | 3:0 | ||
| 1st(1st leg): 03/07/2000 | 2nd (2nd leg): 16/07/2000 | Winner: Liberia | ||||
| 1st(1st leg) | Sierra Leone | - | Togo | 2:0 | ||
| 2nd (2nd leg) | Togo | - | Sierra Leone | 4:2 pso | ||
| 1st(1st leg): 20/08/2000 | 2nd (2nd leg): 03/09/2000 | Winner: Togo | ||||
