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| 1st(1st leg) | Port Autonome | - | ASEC Mimosas | 1:0 | ||
| 2nd (2nd leg) | ASEC Mimosas | - | Port Autonome | 6:0 | ||
| 1st(1st leg): 22/04/2006 | 2nd (2nd leg): 07/05/2006 | Winner: ASEC Mimosas | ||||
| 1st(1st leg) | Orlando Pirates | - | Al Hilal Omdurman | 2:0 | ||
| 2nd (2nd leg) | Al Hilal Omdurman | - | Orlando Pirates | 3:1 | ||
| 1st(1st leg): 22/04/2006 | 2nd (2nd leg): 07/05/2006 | Winner: Orlando Pirates | ||||
| 1st(1st leg) | CS Sfaxien | - | FAR de Rabat | 1:1 | ||
| 2nd (2nd leg) | FAR de Rabat | - | CS Sfaxien | 0:1 | ||
| 1st(1st leg): 22/04/2006 | 2nd (2nd leg): 06/05/2006 | Winner: CS Sfaxien | ||||
| 1st(1st leg) | Hearts of Oak | - | Étoile du Sahel | 1:0 | ||
| 2nd (2nd leg) | Étoile du Sahel | - | Hearts of Oak | 5:6 pso | ||
| 1st(1st leg): 22/04/2006 | 2nd (2nd leg): 07/05/2006 | Winner: Hearts of Oak | ||||
| 1st(1st leg) | Renacimiento FC | - | Al Ahly SC | 0:0 | ||
| 2nd (2nd leg) | Al Ahly SC | - | Renacimiento FC | 4:0 | ||
| 1st(1st leg): 23/04/2006 | 2nd (2nd leg): 06/05/2006 | Winner: Al Ahly SC | ||||
| 1st(1st leg) | Enyimba Aba | - | FC St. Eloi Lupopo | 2:0 | ||
| 2nd (2nd leg) | FC St. Eloi Lupopo | - | Enyimba Aba | 0:1 | ||
| 1st(1st leg): 23/04/2006 | 2nd (2nd leg): 06/05/2006 | Winner: Enyimba Aba | ||||
| 1st(1st leg) | Asante Kotoko | - | Uscafoot Analamanga | 6:0 | ||
| 2nd (2nd leg) | Uscafoot Analamanga | - | Asante Kotoko | 1:0 | ||
| 1st(1st leg): 23/04/2006 | 2nd (2nd leg): 07/05/2006 | Winner: Asante Kotoko | ||||
| 1st(1st leg) | JS Kabylie | - | Raja Casablanca | 3:1 | ||
| 2nd (2nd leg) | Raja Casablanca | - | JS Kabylie | 1:0 | ||
| 1st(1st leg): 23/04/2006 | 2nd (2nd leg): 30/04/2006 | Winner: JS Kabylie | ||||
