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| 27/05/2006 | 13:00 | FC St. Pauli | - | Hamburger SV II | 1:1 (0:0) | |
| 13:00 | Werder Bremen II | - | 1. FC Köln II | 2:2 (1:0) | ||
| 13:00 | Rot-Weiß Erfurt | - | Rot-Weiss Essen | 0:1 (0:0) | ||
| 13:00 | Kickers Emden | - | SG Wattenscheid 09 | 1:0 (0:0) | ||
| 13:00 | VfB Lübeck | - | VfL Osnabrück | 2:0 (1:0) | ||
| 13:00 | Fortuna Düsseldorf | - | Holstein Kiel | 3:0 (1:0) | ||
| 13:00 | Rot-Weiß Oberhausen | - | FC Carl Zeiss Jena | 1:0 (0:0) | ||
| 13:00 | Wuppertaler SV | - | Chemnitzer FC | 3:1 (2:1) | ||
| 13:00 | Bayer Leverkusen II | - | Preußen Münster | 1:3 (0:1) |
| » Tables | First round | Second round |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Rot-Weiss Essen | 36 | 23 | 7 | 6 | 67:34 | 33 | 76 |
| 2 |
|
FC Carl Zeiss Jena | 36 | 22 | 6 | 8 | 58:32 | 26 | 72 |
| 3 |
|
VfB Lübeck | 36 | 20 | 9 | 7 | 60:36 | 24 | 69 |
| 4 |
|
Holstein Kiel | 36 | 19 | 9 | 8 | 64:42 | 22 | 66 |
| 5 |
|
Fortuna Düsseldorf | 36 | 18 | 9 | 9 | 62:47 | 15 | 63 |
| 6 |
|
FC St. Pauli | 36 | 17 | 10 | 9 | 53:38 | 15 | 61 |
| 7 |
|
Hertha BSC II | 36 | 16 | 7 | 13 | 54:44 | 10 | 55 |
| 8 |
|
Wuppertaler SV | 36 | 13 | 12 | 11 | 42:42 | 0 | 51 |
| 9 |
|
Kickers Emden | 36 | 14 | 7 | 15 | 50:45 | 5 | 49 |
| 10 |
|
VfL Osnabrück | 36 | 14 | 7 | 15 | 56:58 | -2 | 49 |
| 11 |
|
Bayer Leverkusen II | 36 | 13 | 5 | 18 | 56:64 | -8 | 44 |
| 12 |
|
Werder Bremen II | 36 | 11 | 10 | 15 | 46:47 | -1 | 43 |
| 13 |
|
Hamburger SV II | 36 | 12 | 7 | 17 | 45:48 | -3 | 43 |
| 14 |
|
Rot-Weiß Erfurt | 36 | 11 | 9 | 16 | 40:48 | -8 | 42 |
| 15 |
|
Preußen Münster | 36 | 12 | 6 | 18 | 37:49 | -12 | 42 |
| 16 |
|
SG Wattenscheid 09 | 36 | 10 | 9 | 17 | 50:65 | -15 | 39 |
| 17 |
|
Rot-Weiß Oberhausen | 36 | 10 | 9 | 17 | 30:53 | -23 | 39 |
| 18 |
|
1. FC Köln II | 36 | 6 | 8 | 22 | 39:74 | -35 | 26 |
| 19 |
|
Chemnitzer FC | 36 | 5 | 6 | 25 | 35:78 | -43 | 21 |
