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| 25/11/2006 | 13:00 | Borussia Dortmund II | - | SV Wilhelmshaven | 2:1 (1:1) | |
| 13:00 | Rot-Weiß Erfurt | - | Hamburger SV II | 0:3 (0:1) | ||
| 13:00 | Dynamo Dresden | - | FC St. Pauli | 3:0 (2:0) | ||
| 13:00 | 1. FC Magdeburg | - | Kickers Emden | 1:1 (1:1) | ||
| 13:00 | Wuppertaler SV | - | Bayer Leverkusen II | 2:0 (1:0) | ||
| 13:00 | Fortuna Düsseldorf | - | Holstein Kiel | 2:0 (0:0) | ||
| 13:00 | VfB Lübeck | - | 1. FC Union Berlin | 0:1 (0:1) | ||
| 13:00 | VfL Osnabrück | - | Bor. Mönchengladbach II | 1:0 (1:0) | ||
| 26/11/2006 | 13:00 | Werder Bremen II | - | Hertha BSC II | 0:1 (0:0) |
| » Tables | Home | Away | First round | Second round |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Wuppertaler SV | 17 | 9 | 4 | 4 | 27:18 | 9 | 31 |
| 2 |
|
VfL Osnabrück | 17 | 9 | 4 | 4 | 29:21 | 8 | 31 |
| 3 |
|
Fortuna Düsseldorf | 17 | 8 | 6 | 3 | 27:18 | 9 | 30 |
| 4 |
|
Dynamo Dresden | 17 | 9 | 3 | 5 | 28:20 | 8 | 30 |
| 5 |
|
1. FC Magdeburg | 17 | 8 | 4 | 5 | 24:20 | 4 | 28 |
| 6 |
|
1. FC Union Berlin | 17 | 8 | 3 | 6 | 24:16 | 8 | 27 |
| 7 |
|
Hamburger SV II | 17 | 7 | 5 | 5 | 24:23 | 1 | 26 |
| 8 |
|
Rot-Weiß Erfurt | 17 | 7 | 5 | 5 | 19:18 | 1 | 26 |
| 9 |
|
Werder Bremen II | 17 | 7 | 4 | 6 | 28:23 | 5 | 25 |
| 10 |
|
VfB Lübeck | 17 | 7 | 3 | 7 | 20:17 | 3 | 24 |
| 11 |
|
Kickers Emden | 17 | 6 | 6 | 5 | 17:15 | 2 | 24 |
| 12 |
|
Rot Weiss Ahlen | 17 | 6 | 4 | 7 | 24:27 | -3 | 22 |
| 13 |
|
FC St. Pauli | 17 | 5 | 7 | 5 | 18:23 | -5 | 22 |
| 14 |
|
Hertha BSC II | 18 | 6 | 3 | 9 | 17:23 | -6 | 21 |
| 15 |
|
Borussia Dortmund II | 17 | 5 | 3 | 9 | 16:27 | -11 | 18 |
| 16 |
|
Holstein Kiel | 17 | 4 | 5 | 8 | 21:27 | -6 | 17 |
| 17 |
|
SV Wilhelmshaven | 17 | 4 | 4 | 9 | 19:26 | -7 | 16 |
| 18 |
|
Bayer Leverkusen II | 17 | 3 | 6 | 8 | 16:23 | -7 | 15 |
| 19 |
|
Bor. Mönchengladbach II | 17 | 2 | 5 | 10 | 15:28 | -13 | 11 |
