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| 13/03/2009 | 18:00 | 1. FC Eintracht Bamberg | - | SV Darmstadt 98 | 2:1 (2:0) | |
| 14/03/2009 | 13:00 | Waldhof Mannheim | - | Viktoria Aschaffenburg | 1:1 (1:0) | |
| 13:00 | Hessen Kassel | - | 1. FC Heidenheim 1846 | 0:1 (0:0) | ||
| 13:00 | SC Freiburg II | - | SSV Reutlingen | 2:3 (0:2) | ||
| 13:00 | SpVgg Greuther Fürth II | - | Eintracht Frankfurt II | 2:1 (1:0) | ||
| 13:00 | SSV Ulm 1846 | - | SV Wehen Wiesbaden II | 2:0 (1:0) | ||
| 15/03/2009 | 13:00 | 1. FC Nürnberg II | - | Karlsruher SC II | 2:1 (1:0) | |
| 14:00 | TSV 1860 München II | - | TSV Großbardorf | 4:0 (2:0) | ||
| 18/03/2009 | 17:30 | SC Pfullendorf | - | SpVgg Unterhaching II | 3:1 (2:1) |
| » Tables | Home | Away | First round | Second round |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Eintracht Frankfurt II | 22 | 12 | 6 | 4 | 38:19 | 19 | 42 |
| 2 |
|
Hessen Kassel | 22 | 12 | 5 | 5 | 43:23 | 20 | 41 |
| 3 |
|
1. FC Heidenheim 1846 | 22 | 12 | 5 | 5 | 35:25 | 10 | 41 |
| 4 |
|
SSV Ulm 1846 | 22 | 10 | 10 | 2 | 36:18 | 18 | 40 |
| 5 |
|
1. FC Nürnberg II | 22 | 11 | 6 | 5 | 45:24 | 21 | 39 |
| 6 |
|
SC Pfullendorf | 22 | 11 | 5 | 6 | 34:27 | 7 | 38 |
| 7 |
|
Waldhof Mannheim | 22 | 11 | 3 | 8 | 35:25 | 10 | 36 |
| 8 |
|
SV Wehen Wiesbaden II | 22 | 11 | 3 | 8 | 28:21 | 7 | 36 |
| 9 |
|
TSV 1860 München II | 22 | 9 | 5 | 8 | 35:30 | 5 | 32 |
| 10 |
|
1. FC Eintracht Bamberg | 22 | 9 | 5 | 8 | 38:40 | -2 | 32 |
| 11 |
|
SpVgg Greuther Fürth II | 22 | 7 | 7 | 8 | 24:23 | 1 | 28 |
| 12 |
|
SV Darmstadt 98 | 22 | 6 | 7 | 9 | 28:32 | -4 | 25 |
| 13 |
|
Viktoria Aschaffenburg | 22 | 5 | 10 | 7 | 23:27 | -4 | 25 |
| 14 |
|
Karlsruher SC II | 22 | 6 | 4 | 12 | 23:37 | -14 | 22 |
| 15 |
|
SSV Reutlingen | 22 | 5 | 6 | 11 | 24:42 | -18 | 21 |
| 16 |
|
SC Freiburg II | 22 | 5 | 4 | 13 | 22:43 | -21 | 19 |
| 17 |
|
TSV Großbardorf | 22 | 3 | 5 | 14 | 23:53 | -30 | 14 |
| 18 |
|
SpVgg Unterhaching II | 22 | 3 | 4 | 15 | 25:50 | -25 | 13 |
| Promotion | |
| Relegation |
