| Period | Manager | Country | born |
| 17/08/2023 - 31/12/2024 | Arturo Reyes |
|
08/04/1969 |
| 15/03/2023 - 17/08/2023 | Hernán Gómez |
|
03/02/1956 |
| 18/11/2022 - 14/03/2023 | Arturo Reyes |
|
08/04/1969 |
| 11/09/2022 - 17/11/2022 | Julio Comesaña |
|
10/03/1948 |
| 01/01/2022 - 10/09/2022 | Juan Cruz Real |
|
08/10/1976 |
| 17/08/2021 - 31/12/2021 | Arturo Reyes |
|
08/04/1969 |
| 15/09/2020 - 17/08/2021 | Luis Perea |
|
30/01/1979 |
| 05/05/2019 - 14/09/2020 | Julio Comesaña |
|
10/03/1948 |
| 01/01/2019 - 04/05/2019 | Luis Suárez |
|
23/12/1959 |
| 09/04/2018 - 31/12/2018 | Julio Comesaña |
|
10/03/1948 |
| 01/01/2018 - 09/04/2018 | Alexis Mendoza |
|
08/11/1961 |
| 27/03/2017 - 31/12/2017 | Julio Comesaña |
|
10/03/1948 |
| 01/01/2017 - 26/03/2017 | Alberto Gamero |
|
03/02/1964 |
| 22/07/2016 - 31/12/2016 | Giovanni Hernández |
|
16/06/1976 |
| 13/11/2014 - 19/07/2016 | Alexis Mendoza |
|
08/11/1961 |
| 19/03/2014 - 12/11/2014 | Julio Comesaña |
|
10/03/1948 |
| 04/06/2013 - 18/03/2014 | Miguel López |
|
01/03/1942 |
| 01/01/2013 - 04/06/2013 | Alexis García |
|
21/07/1960 |
| 05/09/2011 - 31/12/2012 | José Eugenio Hernández |
|
18/03/1956 |
| 01/07/2011 - 04/09/2011 | Jorge Pinto |
|
16/12/1952 |
| 01/01/2011 - 30/06/2011 | Óscar Quintabani |
|
04/06/1950 |
| 01/01/2010 - 31/12/2010 | Diego Umaña |
|
12/03/1952 |
| 01/01/2009 - 31/12/2009 | Julio Comesaña |
|
10/03/1948 |
| 01/07/2003 - 30/06/2004 | Jorge Pinto |
|
16/12/1952 |
| 01/01/2001 - 31/12/2001 | Salvador Capitano |
|
01/01/1955 |
| 01/01/2000 - 30/06/2000 | Juan José Peláez |
|
|
| 01/01/1996 - 30/06/1996 | Luis García |
|
15/07/1950 |
| 01/01/1995 - 31/12/1995 | Carlos Restrepo |
|
05/03/1961 |
| 01/01/1994 - 31/12/1994 | Julio Comesaña |
|
10/03/1948 |
| 01/01/1988 - 31/12/1988 | Miguel López |
|
01/03/1942 |
| 01/01/1984 - 31/12/1984 | José Varacka |
|
27/05/1932 |
| 01/01/1981 - 31/12/1981 | Nelson Gallego |
|
|
| 01/01/1981 - 31/12/1981 | José Varacka |
|
27/05/1932 |
| 01/01/1978 - 31/12/1978 | Miguel López |
|
01/03/1942 |
| 01/01/1978 - 31/12/1978 | Carlos Peña |
|
|
| 01/01/1975 - 31/12/1976 | Jorge C. Habbeger |
|
19/10/1946 |
| 01/01/1971 - 31/12/1971 | Luis Miloc |
|
31/01/1929 |
| 01/07/1951 - 20/06/1953 | Friedrich Donenfeld |
|
17/01/1912 |
![Atlético Junior [Women]](https://s.hs-data.com/bilder/wappen/mini/30145.gif?fallback=png "Atlético Junior [Women]"){kind=small}
![Atlético Junior [U20]](https://s.hs-data.com/bilder/wappen/mini/26709.gif?fallback=png "Atlético Junior [U20]"){kind=small}