3. Round | 12/09/2016 | AE Lárissa | - | AEP Iraklis FC | 2:2 | ||||
4. Round | 18/09/2016 | AEP Iraklis FC | - | Olympiakos Piraeus | 1:2 | ||||
5. Round | 26/09/2016 | AEK Athen | - | AEP Iraklis FC | 0:0 | ||||
6. Round | 01/10/2016 | AEP Iraklis FC | - | Panionios GSS | 1:2 | ||||
7. Round | 16/10/2016 | PAOK Saloniki | - | AEP Iraklis FC | 1:0 | ||||
8. Round | 23/10/2016 | AEP Iraklis FC | - | Atromitos | 1:2 | ||||
9. Round | 30/10/2016 | Panathinaikos | - | AEP Iraklis FC | 2:0 | ||||
10. Round | 07/11/2016 | AEP Iraklis FC | - | Platanias Chanion | 1:1 | ||||
12. Round | 27/11/2016 | Levadiakos | - | AEP Iraklis FC | 3:0 | ||||
14. Round | 11/12/2016 | Panetolikos | - | AEP Iraklis FC | 2:0 |