1. Round | 17/07/2016 | FK Senica | - | Slovan Bratislava | 0:1 | ||||
4. Round | 06/08/2016 | 1. FC Tatran Prešov | - | FK Senica | 0:4 | ||||
6. Round | 20/08/2016 | FK Senica | - | FO ŽP Šport Podbrezová | 0:1 | ||||
8. Round | 10/09/2016 | FK Senica | - | MFK Ružomberok | 1:1 | ||||
9. Round | 17/09/2016 | MŠK Žilina | - | FK Senica | 4:2 | ||||
10. Round | 24/09/2016 | FK Senica | - | Spartak Trnava | 0:1 | ||||
12. Round | 16/10/2016 | Slovan Bratislava | - | FK Senica | 2:0 | ||||
18. Round | 03/12/2016 | FK Senica | - | FC DAC 1904 | 1:1 |