| Champions League Qual. | M. | W | D | L | goals | |||
| at home | 1 | 1 | 0 | 0 | 6 | : | 0 | |
| Away | 1 | 1 | 0 | 0 | 4 | : | 1 | |
| ∑ | 2 | 2 | 0 | 0 | 10 | : | 1 | |
| Europa Conference League | M. | W | D | L | goals | |||
| at home | 1 | 1 | 0 | 0 | 2 | : | 0 | |
| Away | 1 | 0 | 0 | 1 | 0 | : | 1 | |
| ∑ | 2 | 1 | 0 | 1 | 2 | : | 1 | |
| overall | M. | W | D | L | goals | |||
| at home | 2 | 2 | 0 | 0 | 8 | : | 0 | |
| Away | 2 | 1 | 0 | 1 | 4 | : | 2 | |
| Neutral Place | 0 | 0 | 0 | 0 | 0 | : | 0 | |
| ∑ | 4 | 3 | 0 | 1 | 12 | : | 2 | |
| Champions League Qual. | |||||
| 1999/2000 | 1. Round | FC Flora | - | Partizan | 1:4 (0:2) |
| 1999/2000 | 1. Round | Partizan | - | FC Flora | 6:0 (3:0) |
| Europa Conference League | |||||
| 2021/2022 | Group B | FC Flora | - | Partizan | 1:0 (1:0) |
| 2021/2022 | Group B | Partizan | - | FC Flora | 2:0 (2:0) |
|
For games that were decided on penalties the score after 120 minutes will be included in the ranking |
Serbia 
![Partizan [Youth]](https://s.hs-data.com/bilder/wappen/mini/19800.gif?fallback=png "Partizan [Youth]"){kind=small}
![Partizan [Youth B]](https://s.hs-data.com/bilder/wappen/mini/25517.gif?fallback=png "Partizan [Youth B]"){kind=small}
![Partizan [Youth C]](https://s.hs-data.com/bilder/wappen/mini/33270.gif?fallback=png "Partizan [Youth C]"){kind=small}
