1. Round | 05/08/2006 | Grimsby Town | - | Boston United | 3:2 | ||||
2. Round | 09/08/2006 | Boston United | - | Peterborough United | 0:1 | ||||
3. Round | 12/08/2006 | Boston United | - | Darlington FC | 4:1 | ||||
4. Round | 19/08/2006 | Shrewsbury Town | - | Boston United | 5:0 | ||||
7. Round | 09/09/2006 | Boston United | - | Stockport County | 2:1 | ||||
8. Round | 12/09/2006 | Barnet FC | - | Boston United | 3:3 | ||||
9. Round | 16/09/2006 | Accrington Stanley | - | Boston United | 2:1 | ||||
11. Round | 27/09/2006 | Boston United | - | Lincoln City | 1:0 | ||||
12. Round | 30/09/2006 | Swindon Town | - | Boston United | 1:1 | ||||
13. Round | 07/10/2006 | Bristol Rovers | - | Boston United | 1:0 | ||||
14. Round | 14/10/2006 | Boston United | - | Mansfield Town | 1:1 | ||||
16. Round | 28/10/2006 | Boston United | - | Wycombe Wanderers | 0:1 |