Championship   M. W D L goals
  at home 1 0 1 0 2 : 2
  Away 1 0 1 0 3 : 3
  2 0 2 0 5 : 5
League Cup   M. W D L goals
  at home 1 0 0 1 1 : 4
  Away 2 0 0 2 0 : 4
  3 0 0 3 1 : 8
League One   M. W D L goals
  at home 3 1 0 2 5 : 7
  Away 2 0 1 1 2 : 6
  5 1 1 3 7 : 13
overall   M. W D L goals
  at home 5 1 1 3 8 : 13
  Away 5 0 2 3 5 : 13
  Neutral Place 0 0 0 0 0 : 0
  10 1 3 6 13 : 26
Championship
2000/2001 37. Round Bolton Wanderers - Gillingham FC 3:3 (2:1)
2000/2001 11. Round Gillingham FC - Bolton Wanderers 2:2 (0:2)
League Cup
2003/2004 3. Round Bolton Wanderers - Gillingham FC 2:0 (1:0)
1999/2000 2. Round Bolton Wanderers - Gillingham FC 2:0 (2:0)
1999/2000 2. Round Gillingham FC - Bolton Wanderers 1:4 (0:2)
League One
2021/2022 37. Round Gillingham FC - Bolton Wanderers 0:3 (0:1)
2021/2022 15. Round Bolton Wanderers - Gillingham FC 2:2 (0:2)
2019/2020 6. Round Gillingham FC - Bolton Wanderers 5:0 (2:0)
2016/2017 38. Round Gillingham FC - Bolton Wanderers 0:4 (0:3)
2016/2017 21. Round Bolton Wanderers - Gillingham FC 4:0 (2:0)

For games that were decided on penalties the score after 120 minutes will be included in the ranking