2. Round | 22/08/2008 | SpVgg Greuther Fürth | - | FC St. Pauli | 5:2 | ||||
3. Round | 31/08/2008 | FC St. Pauli | - | Rot-Weiß Oberhausen | 4:1 | ||||
10. Round | 29/10/2008 | MSV Duisburg | - | FC St. Pauli | 1:2 | ||||
11. Round | 02/11/2008 | FC St. Pauli | - | 1. FC Nürnberg | 1:0 | ||||
12. Round | 10/11/2008 | SC Freiburg | - | FC St. Pauli | 2:0 | ||||
13. Round | 14/11/2008 | FC St. Pauli | - | Rot Weiss Ahlen | 2:2 | ||||
14. Round | 23/11/2008 | 1. FSV Mainz 05 | - | FC St. Pauli | 2:2 | ||||
15. Round | 30/11/2008 | FC St. Pauli | - | FC Ingolstadt 04 | 1:0 | ||||
16. Round | 07/12/2008 | FC St. Pauli | - | TuS Koblenz | 3:2 | ||||
17. Round | 12/12/2008 | FSV Frankfurt | - | FC St. Pauli | 1:0 | ||||
26. Round | 05/04/2009 | SV Wehen Wiesbaden | - | FC St. Pauli | 3:1 | ||||
27. Round | 12/04/2009 | FC St. Pauli | - | MSV Duisburg | 2:2 | ||||
29. Round | 24/04/2009 | FC St. Pauli | - | SC Freiburg | 1:2 | ||||
32. Round | 14/05/2009 | FC Ingolstadt 04 | - | FC St. Pauli | 0:1 | ||||
33. Round | 17/05/2009 | TuS Koblenz | - | FC St. Pauli | 2:1 | ||||
34. Round | 24/05/2009 | FC St. Pauli | - | FSV Frankfurt | 2:0 |