1. Round | 08/08/2016 | VfB Stuttgart | - | FC St. Pauli | 2:1 | ||||
2. Round | 13/08/2016 | FC St. Pauli | - | Eintracht Braunschweig | 0:2 | ||||
6. Round | 22/09/2016 | FC St. Pauli | - | TSV 1860 München | 2:2 | ||||
7. Round | 26/09/2016 | 1. FC Union Berlin | - | FC St. Pauli | 2:0 | ||||
8. Round | 01/10/2016 | Hannover 96 | - | FC St. Pauli | 2:0 | ||||
10. Round | 22/10/2016 | SV Sandhausen | - | FC St. Pauli | 3:0 | ||||
22. Round | 27/02/2017 | FC St. Pauli | - | Karlsruher SC | 5:0 | ||||
23. Round | 04/03/2017 | TSV 1860 München | - | FC St. Pauli | 1:2 | ||||
25. Round | 18/03/2017 | FC St. Pauli | - | Hannover 96 | 0:0 | ||||
26. Round | 31/03/2017 | Erzgebirge Aue | - | FC St. Pauli | 1:0 | ||||
27. Round | 04/04/2017 | FC St. Pauli | - | SV Sandhausen | 0:0 | ||||
32. Round | 05/05/2017 | 1. FC Kaiserslautern | - | FC St. Pauli | 1:2 | ||||
34. Round | 21/05/2017 | VfL Bochum | - | FC St. Pauli | 1:3 |