1. Round | 31/07/2016 | 1. FC Magdeburg | - | Fortuna Köln | 0:3 | ||||
3. Round | 09/08/2016 | 1. FC Magdeburg | - | SC Paderborn 07 | 3:0 | ||||
4. Round | 13/08/2016 | VfL Osnabrück | - | 1. FC Magdeburg | 3:2 | ||||
5. Round | 26/08/2016 | 1. FC Magdeburg | - | MSV Duisburg | 1:2 | ||||
6. Round | 10/09/2016 | 1. FSV Mainz 05 II | - | 1. FC Magdeburg | 1:0 | ||||
11. Round | 15/10/2016 | Rot-Weiß Erfurt | - | 1. FC Magdeburg | 1:0 | ||||
12. Round | 22/10/2016 | 1. FC Magdeburg | - | Chemnitzer FC | 2:4 | ||||
18. Round | 10/12/2016 | 1. FC Magdeburg | - | VfR Aalen | 3:0 |