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| Tables | Home | Away | First round | Second round | First half | » Second half |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Greuther Fürth | 16 | 11 | 1 | 4 | 21:10 | 11 | 34 |
| 2 |
|
Fortuna Düsseldorf | 16 | 10 | 3 | 3 | 22:9 | 13 | 33 |
| 3 |
|
FC St. Pauli | 16 | 11 | 0 | 5 | 22:13 | 9 | 33 |
| 4 |
|
Eintracht Frankfurt | 16 | 9 | 5 | 2 | 23:10 | 13 | 32 |
| 5 |
|
SC Paderborn 07 | 16 | 9 | 4 | 3 | 15:7 | 8 | 31 |
| 6 |
|
TSV 1860 München | 16 | 6 | 5 | 5 | 17:13 | 4 | 23 |
| 7 |
|
Eintracht Braunschweig | 16 | 5 | 7 | 4 | 10:9 | 1 | 22 |
| 8 |
|
1. FC Union Berlin | 16 | 6 | 4 | 6 | 14:15 | -1 | 22 |
| 9 |
|
MSV Duisburg | 16 | 5 | 6 | 5 | 11:10 | 1 | 21 |
| 10 |
|
Energie Cottbus | 16 | 5 | 5 | 6 | 12:12 | 0 | 20 |
| 11 |
|
FSV Frankfurt | 16 | 5 | 4 | 7 | 11:17 | -6 | 19 |
| 12 |
|
Erzgebirge Aue | 16 | 4 | 6 | 6 | 10:11 | -1 | 18 |
| 13 |
|
Dynamo Dresden | 16 | 4 | 4 | 8 | 13:20 | -7 | 16 |
| 14 |
|
Karlsruher SC | 16 | 4 | 3 | 9 | 7:14 | -7 | 15 |
| 15 |
|
FC Ingolstadt 04 | 16 | 3 | 5 | 8 | 10:23 | -13 | 14 |
| 16 |
|
VfL Bochum | 16 | 2 | 7 | 7 | 8:16 | -8 | 13 |
| 17 |
|
Alemannia Aachen | 16 | 2 | 7 | 7 | 6:14 | -8 | 13 |
| 18 |
|
Hansa Rostock | 16 | 2 | 6 | 8 | 8:17 | -9 | 12 |
| Promotion | |
| Playoffs | |
| Playoffs | |
| Relegation |
