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| Tables | Home | Away | First round | Second round | First half | » Second half |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Greuther Fürth | 19 | 13 | 2 | 4 | 25:10 | 15 | 41 |
| 2 |
|
Fortuna Düsseldorf | 19 | 12 | 4 | 3 | 27:11 | 16 | 40 |
| 3 |
|
FC St. Pauli | 19 | 13 | 0 | 6 | 24:14 | 10 | 39 |
| 4 |
|
Eintracht Frankfurt | 19 | 10 | 6 | 3 | 24:11 | 13 | 36 |
| 5 |
|
SC Paderborn 07 | 19 | 10 | 5 | 4 | 18:10 | 8 | 35 |
| 6 |
|
TSV 1860 München | 19 | 8 | 6 | 5 | 22:15 | 7 | 30 |
| 7 |
|
MSV Duisburg | 19 | 7 | 6 | 6 | 14:13 | 1 | 27 |
| 8 |
|
Eintracht Braunschweig | 19 | 6 | 8 | 5 | 11:11 | 0 | 26 |
| 9 |
|
1. FC Union Berlin | 19 | 7 | 5 | 7 | 16:17 | -1 | 26 |
| 10 |
|
Erzgebirge Aue | 19 | 5 | 7 | 7 | 12:15 | -3 | 22 |
| 11 |
|
Energie Cottbus | 19 | 5 | 6 | 8 | 13:15 | -2 | 21 |
| 12 |
|
Dynamo Dresden | 19 | 5 | 6 | 8 | 17:23 | -6 | 21 |
| 13 |
|
FSV Frankfurt | 19 | 5 | 6 | 8 | 12:20 | -8 | 21 |
| 14 |
|
FC Ingolstadt 04 | 19 | 4 | 6 | 9 | 11:24 | -13 | 18 |
| 15 |
|
VfL Bochum | 19 | 3 | 8 | 8 | 11:17 | -6 | 17 |
| 16 |
|
Alemannia Aachen | 19 | 2 | 9 | 8 | 8:17 | -9 | 15 |
| 17 |
|
Karlsruher SC | 19 | 4 | 3 | 12 | 9:19 | -10 | 15 |
| 18 |
|
Hansa Rostock | 19 | 2 | 7 | 10 | 9:21 | -12 | 13 |
| Promotion | |
| Playoffs | |
| Playoffs | |
| Relegation |
