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| Tables | Home | Away | First round | Second round | First half | » Second half |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Greuther Fürth | 26 | 17 | 4 | 5 | 36:13 | 23 | 55 |
| 2 |
|
Fortuna Düsseldorf | 26 | 15 | 7 | 4 | 34:13 | 21 | 52 |
| 3 |
|
Eintracht Frankfurt | 26 | 13 | 9 | 4 | 33:16 | 17 | 48 |
| 4 |
|
SC Paderborn 07 | 26 | 13 | 7 | 6 | 26:17 | 9 | 46 |
| 5 |
|
FC St. Pauli | 26 | 14 | 4 | 8 | 25:17 | 8 | 46 |
| 6 |
|
TSV 1860 München | 26 | 12 | 7 | 7 | 26:18 | 8 | 43 |
| 7 |
|
1. FC Union Berlin | 26 | 9 | 7 | 10 | 26:26 | 0 | 34 |
| 8 |
|
MSV Duisburg | 26 | 8 | 9 | 9 | 17:21 | -4 | 33 |
| 9 |
|
Dynamo Dresden | 26 | 8 | 9 | 9 | 23:28 | -5 | 33 |
| 10 |
|
Eintracht Braunschweig | 26 | 6 | 14 | 6 | 12:13 | -1 | 32 |
| 11 |
|
FC Ingolstadt 04 | 26 | 7 | 10 | 9 | 19:26 | -7 | 31 |
| 12 |
|
Erzgebirge Aue | 26 | 7 | 9 | 10 | 15:19 | -4 | 30 |
| 13 |
|
Energie Cottbus | 26 | 7 | 7 | 12 | 16:21 | -5 | 28 |
| 14 |
|
Karlsruher SC | 26 | 7 | 6 | 13 | 14:23 | -9 | 27 |
| 15 |
|
FSV Frankfurt | 26 | 6 | 8 | 12 | 15:28 | -13 | 26 |
| 16 |
|
VfL Bochum | 26 | 4 | 10 | 12 | 16:27 | -11 | 22 |
| 17 |
|
Alemannia Aachen | 26 | 2 | 14 | 10 | 9:22 | -13 | 20 |
| 18 |
|
Hansa Rostock | 26 | 3 | 11 | 12 | 15:29 | -14 | 20 |
| Promotion | |
| Playoffs | |
| Playoffs | |
| Relegation |
