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| Tables | Home | Away | First round | Second round | » First half | Second half |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SpVgg Greuther Fürth | 31 | 19 | 9 | 3 | 28:8 | 20 | 66 |
| 2 |
|
Eintracht Frankfurt | 31 | 17 | 8 | 6 | 34:12 | 22 | 59 |
| 3 |
|
1. FC Union Berlin | 31 | 14 | 10 | 7 | 22:18 | 4 | 52 |
| 4 |
|
FC St. Pauli | 31 | 12 | 12 | 7 | 22:15 | 7 | 48 |
| 5 |
|
TSV 1860 München | 31 | 12 | 9 | 10 | 23:20 | 3 | 45 |
| 6 |
|
Eintracht Braunschweig | 31 | 11 | 11 | 9 | 21:17 | 4 | 44 |
| 7 |
|
SC Paderborn 07 | 31 | 10 | 14 | 7 | 19:15 | 4 | 44 |
| 8 |
|
Dynamo Dresden | 31 | 9 | 16 | 6 | 21:18 | 3 | 43 |
| 9 |
|
Fortuna Düsseldorf | 31 | 9 | 14 | 8 | 22:16 | 6 | 41 |
| 10 |
|
Alemannia Aachen | 31 | 8 | 16 | 7 | 17:15 | 2 | 40 |
| 11 |
|
VfL Bochum | 31 | 9 | 13 | 9 | 20:22 | -2 | 40 |
| 12 |
|
FSV Frankfurt | 31 | 9 | 11 | 11 | 20:26 | -6 | 38 |
| 13 |
|
Energie Cottbus | 31 | 8 | 12 | 11 | 10:20 | -10 | 36 |
| 14 |
|
FC Ingolstadt 04 | 31 | 6 | 14 | 11 | 15:21 | -6 | 32 |
| 15 |
|
MSV Duisburg | 31 | 5 | 16 | 10 | 15:19 | -4 | 31 |
| 16 |
|
Hansa Rostock | 31 | 4 | 15 | 12 | 10:19 | -9 | 27 |
| 17 |
|
Erzgebirge Aue | 31 | 1 | 16 | 14 | 11:29 | -18 | 19 |
| 18 |
|
Karlsruher SC | 31 | 3 | 10 | 18 | 13:33 | -20 | 19 |
| Promotion | |
| Playoffs | |
| Playoffs | |
| Relegation |
