| 3. Round | 29/07/2016 | Dinamo Zagreb | - | Slaven Belupo | 1:1 | ||||
| 2. Round | 10/08/2016 | Hajduk Split | - | Dinamo Zagreb | 0:4 | ||||
| 5. Round | 13/08/2016 | Dinamo Zagreb | - | NK Inter Zaprešić | 2:1 | ||||
| 6. Round | 19/08/2016 | Dinamo Zagreb | - | RNK Split | 1:0 | ||||
| 7. Round | 28/08/2016 | NK Istra 1961 | - | Dinamo Zagreb | 1:2 | ||||
| 12. Round | 14/10/2016 | Slaven Belupo | - | Dinamo Zagreb | 0:1 |  |
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| 13. Round | 22/10/2016 | Dinamo Zagreb | - | HNK Cibalia | 3:0 | ||||
| 14. Round | 29/10/2016 | NK Inter Zaprešić | - | Dinamo Zagreb | 0:1 | ||||
| 15. Round | 06/11/2016 | RNK Split | - | Dinamo Zagreb | 0:1 | ||||
| 16. Round | 18/11/2016 | Dinamo Zagreb | - | NK Istra 1961 | 1:1 | ||||
| 21. Round | 18/02/2017 | Dinamo Zagreb | - | Slaven Belupo | 1:0 | ||||
| 25. Round | 19/03/2017 | NK Istra 1961 | - | Dinamo Zagreb | 0:3 | ||||
| 26. Round | 01/04/2017 | Dinamo Zagreb | - | NK Osijek | 2:1 | ||||
| 27. Round | 08/04/2017 | HNK Rijeka | - | Dinamo Zagreb | 1:1 | |
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| 30. Round | 25/04/2017 | Slaven Belupo | - | Dinamo Zagreb | 2:1 | ||||
| 34. Round | 17/05/2017 | Dinamo Zagreb | - | NK Istra 1961 | 2:1 | ||||
| 35. Round | 21/05/2017 | NK Osijek | - | Dinamo Zagreb | 0:1 | ||||
| 36. Round | 27/05/2017 | Dinamo Zagreb | - | HNK Rijeka | 5:2 |
Romania