| 7. Round | 19/09/2012 | Slavia Praha | - | FK Teplice | 2:0 | ||||
| 10. Round | 07/10/2012 | FK Teplice | - | Vysočina Jihlava | 3:1 | ||||
| 11. Round | 21/10/2012 | FC Hradec Králové | - | FK Teplice | 2:0 | ||||
| 12. Round | 28/10/2012 | FK Teplice | - | Sigma Olomouc | 1:1 | ||||
| 13. Round | 03/11/2012 | Baník Ostrava | - | FK Teplice | 3:2 |  |
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| 14. Round | 11/11/2012 | FK Teplice | - | Slovan Liberec | 3:0 | ||||
| 16. Round | 25/11/2012 | FK Teplice | - | Zbrojovka Brno | 2:0 | ||||
| 17. Round | 22/02/2013 | FK Teplice | - | FK Dukla Praha | 1:1 | ||||
| 18. Round | 02/03/2013 | 1. FK Příbram | - | FK Teplice | 3:1 | ||||
| 19. Round | 10/03/2013 | FK Teplice | - | 1. FC Slovácko | 0:4 | ||||
| 20. Round | 17/03/2013 | FK Baumit Jablonec | - | FK Teplice | 0:0 | ||||
| 23. Round | 13/04/2013 | FK Teplice | - | Dynamo České Budějovice | 4:0 | ||||
| 24. Round | 19/04/2013 | Vysočina Jihlava | - | FK Teplice | 1:1 | ||||
| 25. Round | 28/04/2013 | FK Teplice | - | FC Hradec Králové | 0:2 | ||||
| 28. Round | 21/05/2013 | Slovan Liberec | - | FK Teplice | 3:1 | ||||
| 30. Round | 01/06/2013 | FK Mladá Boleslav | - | FK Teplice | 0:4 |
Croatia