| 7. Round | 13/09/2003 | Sheffield Wednesday | - | Stockport County | 2:2 | ||||
| 8. Round | 16/09/2003 | Stockport County | - | Hartlepool United | 1:2 | ||||
| 13. Round | 11/10/2003 | Swindon Town | - | Stockport County | 1:2 | ||||
| 15. Round | 21/10/2003 | Stockport County | - | Colchester United | 1:3 | ||||
| 17. Round | 01/11/2003 | Stockport County | - | Queens Park Rangers | 1:2 |  |
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| 19. Round | 22/11/2003 | Stockport County | - | AFC Bournemouth | 3:2 | ||||
| 20. Round | 29/11/2003 | Barnsley FC | - | Stockport County | 3:3 | ||||
| 23. Round | 26/12/2003 | Stockport County | - | Wrexham AFC | 0:1 | ||||
| 31. Round | 14/02/2004 | Stockport County | - | Swindon Town | 2:4 |  |
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| 35. Round | 06/03/2004 | Stockport County | - | Bristol City | 2:0 | |
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| 36. Round | 13/03/2004 | Brentford FC | - | Stockport County | 0:2 | |
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| 39. Round | 27/03/2004 | Blackpool FC | - | Stockport County | 1:1 | ||||
| 40. Round | 03/04/2004 | Stockport County | - | Rushden & Diamonds FC | 2:1 | ||||
| 41. Round | 10/04/2004 | Chesterfield FC | - | Stockport County | 0:3 | ||||
| 44. Round | 24/04/2004 | Stockport County | - | Grimsby Town | 2:1 | ||||
| 45. Round | 01/05/2004 | AFC Bournemouth | - | Stockport County | 0:0 |
England