| 1. Round | 06/08/2005 | Barnet FC | - | Bristol Rovers | 1:1 | ||||
| 2. Round | 09/08/2005 | Bristol Rovers | - | Grimsby Town | 1:2 | ||||
| 3. Round | 13/08/2005 | Bristol Rovers | - | Peterborough United | 2:3 | ||||
| 9. Round | 17/09/2005 | Chester City | - | Bristol Rovers | 4:0 | ||||
| 28. Round | 14/01/2006 | Cheltenham Town | - | Bristol Rovers | 2:3 | ||||
| 29. Round | 21/01/2006 | Bristol Rovers | - | Chester City | 2:1 |  |
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| 30. Round | 28/01/2006 | Lincoln City | - | Bristol Rovers | 1:0 | ||||
| 27. Round | 31/01/2006 | Bristol Rovers | - | Leyton Orient | 3:3 | ||||
| 31. Round | 04/02/2006 | Bristol Rovers | - | Bury FC | 1:0 | ||||
| 32. Round | 11/02/2006 | Darlington FC | - | Bristol Rovers | 1:1 |  |
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| 33. Round | 14/02/2006 | Bristol Rovers | - | Cheltenham Town | 0:1 | ||||
| 34. Round | 18/02/2006 | Bristol Rovers | - | Stockport County | 2:2 | ||||
| 40. Round | 01/04/2006 | Wycombe Wanderers | - | Bristol Rovers | 1:3 | ||||
| 45. Round | 29/04/2006 | Rochdale AFC | - | Bristol Rovers | 2:0 | ||||
| 46. Round | 06/05/2006 | Bristol Rovers | - | Macclesfield Town | 2:3 |
Wales