| 4. Round | 22/02/2020 | Cusco FC | - | FBC Melgar | 3:1 |  |
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| 5. Round | 28/02/2020 | Universidad Técnica | - | FBC Melgar | 1:1 | ||||
| 6. Round | 08/03/2020 | FBC Melgar | - | Sport Huancayo | 1:0 | ||||
| 9. Round | 01/09/2020 | Sport Boys | - | FBC Melgar | 1:0 | ||||
| 10. Round | 07/09/2020 | FBC Melgar | - | Alianza Lima | 2:2 | ||||
| 11. Round | 12/09/2020 | Academia Cantolao | - | FBC Melgar | 0:2 | ||||
| 12. Round | 18/09/2020 | FBC Melgar | - | Universidad San Martín | 1:1 | ||||
| 13. Round | 23/09/2020 | Cienciano | - | FBC Melgar | 3:1 | ||||
| 15. Round | 01/10/2020 | Llacuabamba | - | FBC Melgar | 1:1 | ||||
| 16. Round | 05/10/2020 | FBC Melgar | - | Ayacucho FC | 0:0 | ||||
| 17. Round | 10/10/2020 | Mannucci | - | FBC Melgar | 1:1 | ||||
| 18. Round | 14/10/2020 | FBC Melgar | - | Atlético Grau | 3:0 |  |
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| 19. Round | 17/10/2020 | Deportivo Municipal | - | FBC Melgar | 1:2 |  |
Peru