| 1. Round | 21/07/2024 | FK Varnsdorf | - | Viktoria Žižkov | 1:1 | ||||
| 3. Round | 31/07/2024 | FK Varnsdorf | - | SFC Opava | 3:1 |  |
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| 4. Round | 03/08/2024 | Zbrojovka Brno | - | FK Varnsdorf | 1:6 | |
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| 2. Round | 07/08/2024 | Baník Ostrava B | - | FK Varnsdorf | 2:0 | ||||
| 5. Round | 11/08/2024 | AC Sparta Praha B | - | FK Varnsdorf | 1:1 | ||||
| 7. Round | 24/08/2024 | SK Líšeň | - | FK Varnsdorf | 1:0 | ||||
| 6. Round | 18/09/2024 | FK Varnsdorf | - | MFK Chrudim | 0:3 | ||||
| 13. Round | 18/10/2024 | Vysočina Jihlava | - | FK Varnsdorf | 1:1 | ||||
| 14. Round | 27/10/2024 | FK Varnsdorf | - | FC Sellier & Bellot Vlašim | 1:2 | ||||
| 16. Round | 10/11/2024 | FK Varnsdorf | - | Baník Ostrava B | 0:0 |
Latvia