| 1. Round | 17/08/2024 | FC Bülach | - | FC Wil 1900 II | 0:1 | ||||
| 2. Round | 24/08/2024 | FC Wil 1900 II | - | FC Schaffhausen II | 3:2 |  |
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| 3. Round | 31/08/2024 | Chur 97 | - | FC Wil 1900 II | 0:3 | ||||
| 4. Round | 07/09/2024 | FC Wil 1900 II | - | FC Gossau | 4:2 | |
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| 10. Round | 12/10/2024 | FC Arbon 05 | - | FC Wil 1900 II | 1:2 | |
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| 11. Round | 20/10/2024 | FC Wil 1900 II | - | KF Dardania St. Gallen | 2:3 | ||||
| 12. Round | 26/10/2024 | FC Seefeld Zürich | - | FC Wil 1900 II | 6:1 | ||||
| 13. Round | 02/11/2024 | FC Wil 1900 II | - | FC Altstätten | 2:2 | |
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| 14. Round | 09/11/2024 | FC Bazenheid | - | FC Wil 1900 II | 4:3 | |
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| 15. Round | 16/11/2024 | FC Wil 1900 II | - | FC Widnau | 3:4 | |
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