| 9. Round | 16/09/2006 | Stockport County | - | Wrexham FC | 5:2 | ||||
| 14. Round | 14/10/2006 | Wrexham FC | - | Milton Keynes Dons | 1:2 |  |
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| 23. Round | 23/12/2006 | Wrexham FC | - | Darlington FC | 1:0 | |
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| 25. Round | 30/12/2006 | Hereford United | - | Wrexham FC | 2:0 | ||||
| 28. Round | 13/01/2007 | Swindon Town | - | Wrexham FC | 2:1 | ||||
| 29. Round | 20/01/2007 | Wrexham FC | - | Hartlepool United | 1:1 | ||||
| 33. Round | 18/02/2007 | Wrexham FC | - | Chester City | 0:0 | ||||
| 34. Round | 20/02/2007 | Grimsby Town | - | Wrexham FC | 2:1 | ||||
| 35. Round | 25/02/2007 | Wrexham FC | - | Shrewsbury Town | 1:3 | ||||
| 36. Round | 03/03/2007 | Barnet FC | - | Wrexham FC | 1:2 | ||||
| 37. Round | 09/03/2007 | Wrexham FC | - | Bury FC | 1:1 | ||||
| 38. Round | 17/03/2007 | Milton Keynes Dons | - | Wrexham FC | 2:1 |
Wales