| 1. Round | 02/08/2024 | Dinamo Zagreb | - | NK Istra 1961 | 5:0 | ||||
| 4. Round | 25/08/2024 | NK Istra 1961 | - | Hajduk Split | 1:1 | ||||
| 7. Round | 20/09/2024 | NK Varaždin | - | NK Istra 1961 | 1:0 | ||||
| 8. Round | 27/09/2024 | HNK Šibenik | - | NK Istra 1961 | 0:0 | ||||
| 19. Round | 25/01/2025 | Dinamo Zagreb | - | NK Istra 1961 | 3:1 | ||||
| 20. Round | 31/01/2025 | NK Istra 1961 | - | HNK Gorica | 0:0 | ||||
| 21. Round | 09/02/2025 | HNK Rijeka | - | NK Istra 1961 | 0:1 | ||||
| 24. Round | 28/02/2025 | NK Istra 1961 | - | Lokomotiva Zagreb | 3:2 | ||||
| 25. Round | 08/03/2025 | NK Varaždin | - | NK Istra 1961 | 0:0 |  |
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| 26. Round | 15/03/2025 | HNK Šibenik | - | NK Istra 1961 | 1:0 |
Bosnia-Herzegovina