| Group A | 25/08/2016 | Deportivo Municipal | - | Juan Aurich | 1:4 | ||||
| Group A | 17/09/2016 | Deportivo Municipal | - | Universidad Cesar Vallejo | 2:1 | ||||
| Group A | 27/09/2016 | Sporting Cristal | - | Deportivo Municipal | 0:2 | ||||
| Group A | 23/10/2016 | Juan Aurich | - | Deportivo Municipal | 0:2 |  |
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| Group A | 29/10/2016 | Deportivo Municipal | - | FBC Melgar | 0:0 | |
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| Group A | 19/11/2016 | Deportivo Municipal | - | Unión Comercio | 2:0 | ||||
| Group A | 24/11/2016 | Deportivo Municipal | - | Sporting Cristal | 1:3 |
Peru