| 1. Round | 26/01/2025 | Atlético Junior | - | Deportivo Cali | 0:0 | ||||
| 2. Round | 02/02/2025 | Atlético Junior | - | Águilas Doradas | 2:2 | ||||
| 3. Round | 08/02/2025 | Unión Magdalena | - | Atlético Junior | 0:0 | ||||
| 4. Round | 13/02/2025 | Atlético Junior | - | Once Caldas | 2:0 |  |
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| 5. Round | 19/02/2025 | Boyacá Chicó | - | Atlético Junior | 0:2 | ||||
| 6. Round | 25/02/2025 | Atlético Junior | - | Envigado FC | 1:2 | ||||
| 7. Round | 01/03/2025 | Atlético Bucaramanga | - | Atlético Junior | 1:1 | ||||
| 8. Round | 09/03/2025 | Atlético Junior | - | Millonarios | 2:1 | |
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| 9. Round | 17/03/2025 | Llaneros FC | - | Atlético Junior | 0:1 | ||||
| 10. Round | 26/03/2025 | Atlético Junior | - | Unión Magdalena | 2:1 | ||||
| 11. Round | 01/04/2025 | La Equidad | - | Atlético Junior | 0:1 | ||||
| 12. Round | 07/04/2025 | Atlético Junior | - | Independiente Medellín | 1:0 | ||||
| 13. Round | 13/04/2025 | Deportivo Pasto | - | Atlético Junior | 3:3 | ||||
| 15. Round | 20/04/2025 | Atlético Junior | - | Alianza FC | 2:0 | ||||
| 17. Round | 04/05/2025 | Atlético Junior | - | América de Cali | 0:0 | ||||
| 18. Round | 11/05/2025 | Santa Fe | - | Atlético Junior | 2:1 |
Colombia