| 1. Round | 25/08/2012 | FC Augsburg | - | Fortuna Düsseldorf | 0:2 | ||||
| 7. Round | 06/10/2012 | 1. FSV Mainz 05 | - | Fortuna Düsseldorf | 1:0 | ||||
| 8. Round | 20/10/2012 | Fortuna Düsseldorf | - | Bayern München | 0:5 | ||||
| 9. Round | 27/10/2012 | Fortuna Düsseldorf | - | VfL Wolfsburg | 1:4 | ||||
| 10. Round | 04/11/2012 | Bayer Leverkusen | - | Fortuna Düsseldorf | 3:2 | ||||
| 11. Round | 10/11/2012 | Fortuna Düsseldorf | - | 1899 Hoffenheim | 1:1 | ||||
| 12. Round | 18/11/2012 | Werder Bremen | - | Fortuna Düsseldorf | 2:1 | ||||
| 13. Round | 23/11/2012 | Fortuna Düsseldorf | - | Hamburger SV | 2:0 | ||||
| 14. Round | 27/11/2012 | Borussia Dortmund | - | Fortuna Düsseldorf | 1:1 | ||||
| 15. Round | 30/11/2012 | Fortuna Düsseldorf | - | Eintracht Frankfurt | 4:0 | ||||
| 16. Round | 08/12/2012 | 1. FC Nürnberg | - | Fortuna Düsseldorf | 2:0 | ||||
| 17. Round | 15/12/2012 | Fortuna Düsseldorf | - | Hannover 96 | 2:1 | ||||
| 18. Round | 20/01/2013 | Fortuna Düsseldorf | - | FC Augsburg | 2:3 | ||||
| 19. Round | 26/01/2013 | Bor. Mönchengladbach | - | Fortuna Düsseldorf | 2:1 | ||||
| 32. Round | 04/05/2013 | Eintracht Frankfurt | - | Fortuna Düsseldorf | 3:1 |
Spain