| 7. Round | 30/09/2016 | Mosta FC | - | Hamrun Spartans | 2:5 | ||||
| 8. Round | 15/10/2016 | Tarxien Rainbows | - | Mosta FC | 1:1 |  |
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| 9. Round | 22/10/2016 | Mosta FC | - | Floriana FC | 0:1 | ||||
| 10. Round | 30/10/2016 | Sliema Wanderers | - | Mosta FC | 1:1 | ||||
| 12. Round | 19/11/2016 | Mosta FC | - | Balzan FC | 0:1 | ||||
| 16. Round | 04/01/2017 | Mosta FC | - | Birkirkara FC | 0:2 | |
Jamaica