| 2. Round | 09/08/2005 | Notts County | - | Wrexham AFC | 1:0 | ||||
| 4. Round | 20/08/2005 | Wrexham AFC | - | Carlisle United | 0:1 | ||||
| 5. Round | 27/08/2005 | Bury FC | - | Wrexham AFC | 2:2 | ||||
| 6. Round | 29/08/2005 | Wrexham AFC | - | Barnet FC | 3:1 | ||||
| 8. Round | 10/09/2005 | Wrexham AFC | - | Cheltenham Town | 2:0 | ||||
| 9. Round | 17/09/2005 | Leyton Orient | - | Wrexham AFC | 1:1 | ||||
| 12. Round | 01/10/2005 | Wrexham AFC | - | Stockport County | 3:0 | ||||
| 14. Round | 15/10/2005 | Wrexham AFC | - | Torquay United | 4:2 | ||||
| 13. Round | 25/10/2005 | Peterborough United | - | Wrexham AFC | 1:1 | ||||
| 16. Round | 29/10/2005 | Wrexham AFC | - | Darlington FC | 1:0 | ||||
| 31. Round | 04/02/2006 | Wrexham AFC | - | Wycombe Wanderers | 2:0 | ||||
| 33. Round | 14/02/2006 | Wrexham AFC | - | Rushden & Diamonds FC | 2:0 | ||||
| 35. Round | 25/02/2006 | Wrexham AFC | - | Northampton Town | 0:1 | ||||
| 37. Round | 11/03/2006 | Wrexham AFC | - | Bury FC | 0:0 | ||||
| 32. Round | 14/03/2006 | Macclesfield Town | - | Wrexham AFC | 3:2 | ||||
| 38. Round | 18/03/2006 | Rochdale AFC | - | Wrexham AFC | 0:1 | ||||
| 30. Round | 21/03/2006 | Cheltenham Town | - | Wrexham AFC | 2:2 |
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