| Group A | 21/08/2016 | Juan Aurich | - | Real Garcilaso | 2:1 | ||||
| Group A | 25/08/2016 | Deportivo Municipal | - | Juan Aurich | 1:4 |  |
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| Group A | 10/09/2016 | Juan Aurich | - | Defensor La Bocana | 1:3 | ||||
| Group A | 17/09/2016 | Unión Comercio | - | Juan Aurich | 2:2 | ||||
| Group A | 25/09/2016 | Sporting Cristal | - | Juan Aurich | 3:0 |  |
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| Group A | 18/10/2016 | Real Garcilaso | - | Juan Aurich | 1:1 | ||||
| Group A | 23/10/2016 | Juan Aurich | - | Deportivo Municipal | 0:2 | ||||
| Group A | 31/10/2016 | Defensor La Bocana | - | Juan Aurich | 0:3 | ||||
| Group A | 03/11/2016 | Juan Aurich | - | Unión Comercio | 2:1 | |
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| Group A | 19/11/2016 | Juan Aurich | - | Sporting Cristal | 0:0 | ||||
| Group A | 22/11/2016 | FBC Melgar | - | Juan Aurich | 1:2 | |
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| Group A | 27/11/2016 | Juan Aurich | - | Universidad Cesar Vallejo | 0:1 |
Panama