| 3. Round | 11/09/2016 | AE Zakakiou | - | Apollon Limassol | 0:4 | ||||
| 4. Round | 18/09/2016 | Apollon Limassol | - | AEK Larnaca | 0:1 |  |
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| 5. Round | 24/09/2016 | AEL Limassol | - | Apollon Limassol | 2:1 | |
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| 6. Round | 02/10/2016 | Apollon Limassol | - | Omonia Nikosia | 2:1 | |
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| 7. Round | 16/10/2016 | Ermis Aradippou | - | Apollon Limassol | 3:2 | |
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| 9. Round | 30/10/2016 | Doxa Katokopias | - | Apollon Limassol | 0:1 | ||||
| 10. Round | 06/11/2016 | Apollon Limassol | - | Ethnikos Achna | 3:2 | |
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| 11. Round | 20/11/2016 | Karmiotissa Polemidion | - | Apollon Limassol | 0:6 | ||||
| 24. Round | 19/02/2017 | Apollon Limassol | - | Karmiotissa Polemidion | 3:0 |
Cyprus