| 6. Round | 03/09/2016 | Peterborough United | - | Swindon Town | 2:2 | ||||
| 8. Round | 17/09/2016 | Swindon Town | - | Bury FC | 1:2 | ||||
| 5. Round | 20/09/2016 | Swindon Town | - | Bristol Rovers | 1:2 | ||||
| 10. Round | 27/09/2016 | Swindon Town | - | Northampton Town | 1:3 |  |
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| 11. Round | 01/10/2016 | Shrewsbury Town | - | Swindon Town | 1:1 | ||||
| 12. Round | 08/10/2016 | Swindon Town | - | Bolton Wanderers | 0:1 | ||||
| 13. Round | 15/10/2016 | AFC Wimbledon | - | Swindon Town | 0:0 | ||||
| 14. Round | 18/10/2016 | Swindon Town | - | Rochdale AFC | 3:0 | ||||
| 15. Round | 22/10/2016 | Swindon Town | - | Walsall FC | 0:2 | ||||
| 16. Round | 29/10/2016 | Scunthorpe United | - | Swindon Town | 4:1 | ||||
| 17. Round | 12/11/2016 | Swindon Town | - | Charlton Athletic | 3:0 | ||||
| 19. Round | 22/11/2016 | Southend United | - | Swindon Town | 1:1 | ||||
| 22. Round | 17/12/2016 | Swindon Town | - | Fleetwood Town | 1:1 | ||||
| 23. Round | 26/12/2016 | Millwall FC | - | Swindon Town | 2:0 | ||||
| 24. Round | 30/12/2016 | Milton Keynes Dons | - | Swindon Town | 3:2 | ||||
| 25. Round | 02/01/2017 | Swindon Town | - | Southend United | 0:0 | ||||
| 26. Round | 07/01/2017 | Swindon Town | - | Shrewsbury Town | 1:1 | ||||
| 27. Round | 14/01/2017 | Bolton Wanderers | - | Swindon Town | 1:2 |
England
