| 1. Round | 31/08/2008 | AEK Athen | - | Panathinaikos | 2:1 |  |
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| 2. Round | 14/09/2008 | PAOK Saloniki | - | AEK Athen | 1:1 | ||||
| 3. Round | 21/09/2008 | AEK Athen | - | Iraklis Saloniki | 1:0 | ||||
| 4. Round | 28/09/2008 | Panionios GSS | - | AEK Athen | 2:2 | ||||
| 5. Round | 05/10/2008 | Olympiakos Piraeus | - | AEK Athen | 2:0 | |
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| 11. Round | 23/11/2008 | OFI Heraklion | - | AEK Athen | 1:1 | ||||
| 12. Round | 30/11/2008 | Levadiakos | - | AEK Athen | 0:0 | ||||
| 13. Round | 07/12/2008 | AEK Athen | - | Panthrakikos | 1:0 | ||||
| 14. Round | 14/12/2008 | Aris Saloniki | - | AEK Athen | 1:1 | ||||
| 15. Round | 21/12/2008 | AEK Athen | - | Ergotelis | 3:2 | |
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| 16. Round | 04/01/2009 | Panathinaikos | - | AEK Athen | 0:0 | ||||
| 17. Round | 11/01/2009 | AEK Athen | - | PAOK Saloniki | 1:0 | |
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| 18. Round | 17/01/2009 | Iraklis Saloniki | - | AEK Athen | 0:1 | ||||
| 19. Round | 25/01/2009 | AEK Athen | - | Panionios GSS | 3:0 | ||||
| 20. Round | 01/02/2009 | AEK Athen | - | Olympiakos Piraeus | 0:1 | |
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| 22. Round | 14/02/2009 | AEK Athen | - | Thrasyvoulos Fylis | 1:0 | |
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| 24. Round | 28/02/2009 | AEK Athen | - | Skoda Xanthi | 2:1 | |
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| 26. Round | 14/03/2009 | AEK Athen | - | OFI Heraklion | 1:0 | ||||
| 27. Round | 22/03/2009 | AEK Athen | - | Levadiakos | 3:1 |
Greece