| 4. Round | 26/08/2003 | York City | - | Southend United | 2:0 | ||||
| 5. Round | 30/08/2003 | Lincoln City | - | York City | 3:0 | ||||
| 6. Round | 06/09/2003 | York City | - | Rochdale AFC | 1:2 | ||||
| 7. Round | 13/09/2003 | Yeovil Town | - | York City | 3:0 | ||||
| 8. Round | 16/09/2003 | York City | - | Darlington FC | 1:1 | ||||
| 32. Round | 21/02/2004 | Boston United | - | York City | 2:0 |
England