| 6. Round | 27/04/2018 | Arema Cronus FC | - | Persipura Jayapura | 3:1 |  |
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| 9. Round | 19/05/2018 | Persipura Jayapura | - | Madura United | 6:0 | |
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| 12. Round | 04/06/2018 | Persipura Jayapura | - | PSM Makassar | 1:1 | ||||
| 13. Round | 09/06/2018 | Bali United | - | Persipura Jayapura | 2:0 | ||||
| 17. Round | 22/07/2018 | Perseru Serui | - | Persipura Jayapura | 0:0 | ||||
| 18. Round | 29/07/2018 | Persela Lamongan | - | Persipura Jayapura | 3:2 | ||||
| 20. Round | 11/08/2018 | PS-TIRA | - | Persipura Jayapura | 1:0 | ||||
| 21. Round | 11/09/2018 | Persipura Jayapura | - | Sriwijaya FC | 1:0 | ||||
| 28. Round | 30/10/2018 | Persipura Jayapura | - | Persebaya Surabaya | 3:1 | ||||
| 29. Round | 04/11/2018 | PSM Makassar | - | Persipura Jayapura | 4:2 | ||||
| 30. Round | 10/11/2018 | Persipura Jayapura | - | Bali United | 1:0 | ||||
| 31. Round | 19/11/2018 | Bhayangkara Surabaya United F.C | - | Persipura Jayapura | 2:0 | ||||
| 32. Round | 24/11/2018 | Persipura Jayapura | - | PSMS Medan (ISL) | 3:1 | ||||
| 33. Round | 01/12/2018 | PSIS Semarang | - | Persipura Jayapura | 2:1 | |
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| 34. Round | 09/12/2018 | Persipura Jayapura | - | Perseru Serui | 0:2 | |
Indonesia