| 4. Round | 10/11/2023 | Delhi FC | - | Mohammedan SC | 1:2 | ||||
| 5. Round | 18/11/2023 | Rajasthan United | - | Mohammedan SC | 1:2 | ||||
| 8. Round | 03/12/2023 | Mohammedan SC | - | Sreenidi Deccan | 2:1 | ||||
| 9. Round | 08/12/2023 | Mohammedan SC | - | Gokulam Kerala | 1:1 |  |
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| 10. Round | 13/12/2023 | Namdhari FC | - | Mohammedan SC | 0:1 | |
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| 11. Round | 17/12/2023 | Churchill Brothers | - | Mohammedan SC | 0:0 | ||||
| 12. Round | 24/12/2023 | Mohammedan SC | - | NEROCA FC | 2:1 | |
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| 13. Round | 04/02/2024 | Mohammedan SC | - | Real Kashmir | 0:3 | ||||
| 14. Round | 10/02/2024 | Aizawl FC | - | Mohammedan SC | 0:0 | ||||
| 15. Round | 13/02/2024 | Mohammedan SC | - | Rajasthan United | 5:1 | ||||
| 16. Round | 17/02/2024 | TRAU FC | - | Mohammedan SC | 0:2 | ||||
| 18. Round | 29/02/2024 | Sreenidi Deccan | - | Mohammedan SC | 1:1 | ||||
| 22. Round | 17/03/2024 | NEROCA FC | - | Mohammedan SC | 0:2 | ||||
| 25. Round | 06/04/2024 | Shillong Lajong FC | - | Mohammedan SC | 1:2 | |
India