| 1. Round | 12/08/2016 | Arsenal FC U23 | - | Reading FC U23 | 0:2 | ||||
| 3. Round | 26/08/2016 | Arsenal FC U23 | - | Liverpool FC U23 | 1:3 |  |
|||
| 5. Round | 19/09/2016 | Arsenal FC U23 | - | Everton FC U23 | 0:5 | ||||
| 6. Round | 23/09/2016 | Chelsea FC U23 | - | Arsenal FC U23 | 1:2 | ||||
| 8. Round | 24/10/2016 | Manchester United U23 | - | Arsenal FC U23 | 1:0 | ||||
| 9. Round | 28/10/2016 | Arsenal FC U23 | - | Sunderland AFC U23 | 4:0 | ||||
| 11. Round | 28/11/2016 | Arsenal FC U23 | - | Leicester City U23 | 3:0 | ||||
| 14. Round | 06/01/2017 | Arsenal FC U23 | - | Derby County U23 | 2:1 | ||||
| 17. Round | 06/02/2017 | Everton FC U23 | - | Arsenal FC U23 | 1:0 | ||||
| 18. Round | 19/02/2017 | Leicester City U23 | - | Arsenal FC U23 | 2:1 | ||||
| 19. Round | 03/03/2017 | Arsenal FC U23 | - | Tottenham Hotspur U23 | 2:0 | ||||
| 22. Round | 22/04/2017 | Sunderland AFC U23 | - | Arsenal FC U23 | 2:1 | ||||
| 13. Round | 08/05/2017 | Arsenal FC U23 | - | Manchester United U23 | 2:2 |
Romania