| Group F | 23/02/2016 | Buriram United | - | FC Seoul | 0:6 | ||||
| Group F | 01/03/2016 | FC Seoul | - | Sanfrecce Hiroshima | 4:1 | ||||
| Group F | 16/03/2016 | Shandong Taishan | - | FC Seoul | 1:4 |  |
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| Group F | 05/04/2016 | FC Seoul | - | Shandong Taishan | 0:0 | ||||
| Group F | 20/04/2016 | FC Seoul | - | Buriram United | 2:1 | ||||
| Round of 16 | 18/05/2016 | Urawa Red Diamonds | - | FC Seoul | 1:0 | ||||
| Round of 16 | 25/05/2016 | FC Seoul | - | Urawa Red Diamonds | 7:6 pso | |
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| Quarter-finals | 24/08/2016 | FC Seoul | - | Shandong Taishan | 3:1 | ||||
| Quarter-finals | 14/09/2016 | Shandong Taishan | - | FC Seoul | 1:1 | ||||
| Semi-finals | 28/09/2016 | Jeonbuk FC | - | FC Seoul | 4:1 |  |
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| Semi-finals | 19/10/2016 | FC Seoul | - | Jeonbuk FC | 2:1 | |
South Korea