| 3. Round | 10/09/2016 | Levadiakos | - | Panathinaikos | 0:3 | ||||
| 4. Round | 17/09/2016 | Platanias Chanion | - | Levadiakos | 3:2 | ||||
| 5. Round | 25/09/2016 | Levadiakos | - | AO Kerkyra | 2:1 | ||||
| 6. Round | 01/10/2016 | Levadiakos | - | AE Lárissa | 1:1 | ||||
| 8. Round | 23/10/2016 | Levadiakos | - | Panetolikos | 2:1 | ||||
| 9. Round | 30/10/2016 | Asteras Tripolis | - | Levadiakos | 1:0 |  |
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| 10. Round | 05/11/2016 | Levadiakos | - | Xanthi FC | 1:1 | ||||
| 7. Round | 23/11/2016 | PAS Giannina | - | Levadiakos | 0:0 | ||||
| 12. Round | 27/11/2016 | Levadiakos | - | AEP Iraklis FC | 3:0 | ||||
| 13. Round | 04/12/2016 | Olympiakos Piraeus | - | Levadiakos | 4:0 | |
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| 14. Round | 10/12/2016 | AEK Athen | - | Levadiakos | 4:0 | ||||
| 15. Round | 18/12/2016 | Levadiakos | - | Panionios GSS | 1:4 | |
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| 21. Round | 20/02/2017 | AE Lárissa | - | Levadiakos | 2:1 | ||||
| 23. Round | 04/03/2017 | Panetolikos | - | Levadiakos | 2:0 | ||||
| 24. Round | 13/03/2017 | Levadiakos | - | Asteras Tripolis | 1:1 | ||||
| 25. Round | 19/03/2017 | Xanthi FC | - | Levadiakos | 2:2 | ||||
| 27. Round | 05/04/2017 | AEP Iraklis FC | - | Levadiakos | 1:0 |
Guinea-Bissau
Portugal