| 4. Round | 10/08/2016 | FK Sarajevo | - | FK Krupa | 3:2 |  |
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| 5. Round | 13/08/2016 | FK Krupa | - | Olimpic Sarajevo | 2:0 | ||||
| 6. Round | 21/08/2016 | Široki Brijeg | - | FK Krupa | 3:1 | ||||
| 8. Round | 10/09/2016 | Željezničar Sarajevo | - | FK Krupa | 2:1 | ||||
| 10. Round | 24/09/2016 | Čelik Zenica | - | FK Krupa | 1:2 | ||||
| 11. Round | 01/10/2016 | FK Krupa | - | NK Vitez | 2:0 | ||||
| 12. Round | 15/10/2016 | FK Mladost Doboj-Kakanj | - | FK Krupa | 0:1 | ||||
| 13. Round | 22/10/2016 | FK Krupa | - | NK Metalleghe-BSI | 1:0 | ||||
| 14. Round | 29/10/2016 | Radnik Bijeljina | - | FK Krupa | 3:1 | ||||
| 18. Round | 03/12/2016 | Sloboda Tuzla | - | FK Krupa | 2:1 |
Serbia