| Period | Manager | Country | born |
| 18/09/2021 - 30/06/2022 | Borimir Perković |
|
25/09/1967 |
| 09/06/2021 - 17/09/2021 | Mirko Labrović |
|
29/12/1967 |
| 26/04/2020 - 08/03/2021 | Tomislav Ivković |
|
11/08/1960 |
| 04/01/2020 - 08/04/2020 | Željko Petrović |
|
13/11/1965 |
| 01/07/2014 - 04/01/2020 | Samir Toplak |
|
23/04/1970 |
| 14/03/2013 - 18/11/2013 | Rajko Magić |
|
03/02/1955 |
| 23/04/2012 - 14/03/2013 | Borimir Perković |
|
25/09/1967 |
| 12/04/2010 - 22/04/2012 | Ilija Lončarević |
|
08/10/1944 |
| 20/10/2008 - 11/04/2010 | Borimir Perković |
|
25/09/1967 |
| 01/07/2007 - 19/10/2008 | Milivoje Bračun |
|
22/04/1958 |
| 01/10/2006 - 31/08/2007 | Ante Čačić |
|
29/09/1953 |
| 01/05/2004 - 31/12/2006 | Srećko Bogdan |
|
05/01/1957 |
| 01/07/2003 - 30/06/2004 | Josip Kuže |
|
13/11/1952 |
| 01/07/2002 - 15/03/2003 | Ante Čačić |
|
29/09/1953 |
| 01/07/1993 - 30/06/1995 | Ante Čačić |
|
29/09/1953 |
| 01/07/1990 - 30/11/1992 | Ilija Lončarević |
|
08/10/1944 |
![NK Inter Zaprešić [Youth]](https://s.hs-data.com/bilder/wappen/mini/19917.gif?fallback=png "NK Inter Zaprešić [Youth]"){kind=small}
![NK Inter Zaprešić [Youth B]](https://s.hs-data.com/bilder/wappen/mini/25011.gif?fallback=png "NK Inter Zaprešić [Youth B]"){kind=small}
![NK Inter Zaprešić [Youth C]](https://s.hs-data.com/bilder/wappen/mini/42189.gif?fallback=png "NK Inter Zaprešić [Youth C]"){kind=small}