| 5. Round | 08/09/1996 | VfB Lübeck | - | FC Carl Zeiss Jena | 1:0 | ||||
| 6. Round | 15/09/1996 | FC Carl Zeiss Jena | - | FSV Zwickau | 2:1 | ||||
| 8. Round | 30/09/1996 | FC Carl Zeiss Jena | - | Eintracht Frankfurt | 1:1 | ||||
| 9. Round | 07/10/1996 | SV Meppen | - | FC Carl Zeiss Jena | 0:0 | ||||
| 10. Round | 12/10/1996 | FC Carl Zeiss Jena | - | SpVgg Unterhaching | 1:1 | ||||
| 11. Round | 20/10/1996 | Stuttgarter Kickers | - | FC Carl Zeiss Jena | 1:2 | ||||
| 12. Round | 25/10/1996 | FC Carl Zeiss Jena | - | Fortuna Köln | 1:1 | ||||
| 13. Round | 01/11/1996 | FC Carl Zeiss Jena | - | KFC Uerdingen 05 | 2:2 | ||||
| 24. Round | 04/04/1997 | FC Carl Zeiss Jena | - | Waldhof Mannheim | 1:1 | ||||
| 25. Round | 11/04/1997 | Eintracht Frankfurt | - | FC Carl Zeiss Jena | 1:1 | ||||
| 26. Round | 20/04/1997 | FC Carl Zeiss Jena | - | SV Meppen | 2:1 | ||||
| 27. Round | 27/04/1997 | SpVgg Unterhaching | - | FC Carl Zeiss Jena | 2:1 | ||||
| 28. Round | 04/05/1997 | FC Carl Zeiss Jena | - | Stuttgarter Kickers | 0:0 | ||||
| 29. Round | 09/05/1997 | Fortuna Köln | - | FC Carl Zeiss Jena | 2:0 |
Serbia
Austria