| 34. Round | 12/03/2012 | FK Tom Tomsk | - | Volga Nizhniy Novgorod | 1:0 | ||||
| 35. Round | 18/03/2012 | FK Amkar Perm | - | FK Tom Tomsk | 0:0 | ||||
| 38. Round | 08/04/2012 | FK Krasnodar | - | FK Tom Tomsk | 3:1 | ||||
| 43. Round | 07/05/2012 | FK Tom Tomsk | - | Spartak Nalchik | 1:1 | ||||
| 44. Round | 13/05/2012 | FK Tom Tomsk | - | FK Rostov | 2:1 |
Russia